| 
                                                
                                              | Monitoring of the threatened Delta Green Ground Beetle at the East Wilcox Ranch (Solano County, CA) in 2007  | Upland Habitat and Wildlife Friendly Agriculture  | Arnold, R.  | 2008  | 
						
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                                              | Potential Sensitive Plant Species at Selby Creek  | Upland Habitat and Wildlife Friendly Agriculture  | Baker, A.  | 2006  | 
						
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                                              | Selby Creek - Silverado Trail Culvert Fish Passage Assessment  | Upland Habitat and Wildlife Friendly Agriculture  | Koehler, J. and  Blank, P.   | 2006  | 
						
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                                              | Wilcox Ranch 2008-2011 Ecological Monitoring Report  | Upland Habitat and Wildlife Friendly Agriculture  | Vollmar Natural Lands Consulting  | 2/2012  | 
						
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                                              | Monitoring of the threatened Delta Green Ground Beetle at the East Wilcox Ranch (Solano County, CA) in 2008  | Upland Habitat and Wildlife Friendly Agriculture  | Arnold, R.  | 2009  | 
						
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                                              | Monitoring of the threatened Delta Green Ground Beetle at the East Wilcox Ranch (Solano County, CA) in 2009  | Upland Habitat and Wildlife Friendly Agriculture  | Arnold, R.  | 2010  | 
						
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                                              | Monitoring of the threatened Delta Green Ground Beetle at the East Wilcox Ranch (Solano County, CA) in 2010  | Upland Habitat and Wildlife Friendly Agriculture  | Arnold, R.  | 2011  | 
						
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                                              | Flooded Islands Pre-Feasibility Study Report  | Shallow Water and Marsh Habitat  | Bishop, D.  | 2005  | 
						
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                                              | Tidal wetland restoration in San Francisco Bay: History and current issues  | Shallow Water and Marsh Habitat  | Callaway, J. C.,  Parker, V. T.,  Vasey, M. C.,  Schile, L. M. and  Herbert, E.   | 12/11/2015  | 
						
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                                              | Restoration trajectories and food web linkages in San Francisco Bay's estuarine marshes: a manipulative translocation experiment  | Shallow Water and Marsh Habitat  | Howe, E. R. and  Simenstad, C. A.   | 2007  | 
						
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                                              | Isotopic determination of food web origins in restoring and ancient estuarine wetlands of the San Francisco Bay and Delta  | Shallow Water and Marsh Habitat  | Howe, E. R. and  Simenstad, C. A.   | 2011  | 
						
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                                              | Landscape influence on the quality of heron and egret colony sites  | Shallow Water and Marsh Habitat  | Kelly, J. P.,  Stralberg, D.,  Etienne, K. and  McCaustland, M.  | 2008  | 
						
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                                              | Vegetation colonization in a restoring tidal marsh: a remote sensing approach  | Shallow Water and Marsh Habitat  | Tuxen, K. A.,  Schile, L. M.,  Kelly, M. and  Siegel, S. W.   | 2008  | 
						
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                                              | Primary productivity rates and nutrient availability in natural and restoring wetlands of the northern San Francisco Estuary  | Shallow Water and Marsh Habitat  | Cohen, R. A., Wilkerson, F. P. and  Carpenter, E. J.  | 2011  | 
						
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                                              | Mapping changes to vegetation pattern in a restoring wetland: finding pattern metrics that are consisten across spatial scale and time  | Shallow Water and Marsh Habitat  | Kelly, M.,  Tuxen, K. A. and  Stralberg, D.   | 2011  | 
						
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                                              | Genetic Assay Technical Paper  | Non-Native Invasive Species  | Brandl, S.  | 2013  | 
						
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                                              | Captive Feeding Trial Report  | Non-Native Invasive Species  | Brandl, S.  | 2013  | 
						
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                                              | Quantifying incidence of predation on salmonids and other species of interest using high-throughput qPCR found in gut contents  | Non-Native Invasive Species  | Brandl, S.  | 2014  | 
						
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                                              | Persistence of delta smelt DNA in the gut of Mississippi silversides and other preliminary experiments for detecting prey in non-native fish stomachs using real-time PCR.  | Non-Native Invasive Species  | Brandl, S.,  Schreier, B.,  Conrad, J. L. and  Baerwald, M.  | 2012  | 
						
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                                              | Surveys of selected marshlands in the San Francisco Estuary California Clapper Rail (Rallus longirostris obsoletus): Invasive Spartina Project, 2007.    | Non-Native Invasive Species  | Avocet Research Associates  | 7/9/2007  | 
						
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                                              | Laboratory Protocols for Genotyping Spartina  | Non-Native Invasive Species  | Feinstein, L.  | 2009  | 
						
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                                              | San Francisco Estuary Invasive Spartina Project 2008-2009 Monitoring Report  | Non-Native Invasive Species  | Hogle, I.  | 2011  | 
						
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                                              | San Francisco Estuary Invasive Spartina Project Monitoring Program Quality Assurance Document  | Non-Native Invasive Species  | Hogle, I.,  Kerr, D.,  Olofson, P. and  McBroom, J.   | 2008  | 
						
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                                              | Summary of Suspended-Sediment Concentration Data, San Francisco Bay, California, Water Year 2001  | Hydrodynamics, Sediment Transport, and Flow Regimes  | Buchanan, P. A. and N. K. Ganju  | 2003  | 
						
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                                              | Sacramento River Ecological Flows Study: Off-Channel Habitat Study Results  | Hydrodynamics, Sediment Transport, and Flow Regimes  | Kondolf, G. M.  | 2007  | 
						
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                                              | Sacramento River Ecological Flows Study: Meander Migration Modeling Final Report  | Hydrodynamics, Sediment Transport, and Flow Regimes  | Larsen, E. W.  | 2007  | 
						
							 | 
                                                
                                              | Sacramento River Ecological Flows Study: Final Report  | Hydrodynamics, Sediment Transport, and Flow Regimes  | The Nature Conservancy,  Stillwater Sciences and  ESSA Technologies  | 2008  | 
						
							 | 
                                                
                                              | Sacramento River Ecological Flows Study: State of the System Report (Public Review Draft)  | Hydrodynamics, Sediment Transport, and Flow Regimes  | Stillwater Sciences  | 2006  | 
						
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                                              | Linking Biological Responses to River Processes: Implications for Conservation and Management of the Sacramento River – A Focal Species Approach: Final Report  | Hydrodynamics, Sediment Transport, and Flow Regimes  | Stillwater Sciences  | 2007  | 
						
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                                              | Sacramento River Ecological Flows Study: Gravel Study Final Report  | Hydrodynamics, Sediment Transport, and Flow Regimes  | Stillwater Sciences  | 2007  | 
						
							 | 
                                                
                                              | Physical Modeling Experiments to Guide River Restoration Projects: Restoration Manuals  | Hydrodynamics, Sediment Transport, and Flow Regimes  | Stillwater Sciences,  University of California Berkeley and  San Francisco State University  | 2008  | 
						
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                                              | Stockton Deep Water Ship Channel tidal hydraulics and downstream tidal exchange.   | Ecosystem Water and Sediment Quality  | Brown, R. T.  | 2002  | 
						
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                                              | Zooplankton abundance and diversity in the lower San Joaquin River above the Stocton Deep Water Ship Channel.   | Ecosystem Water and Sediment Quality  | Brunell, M. S., G. M. Litton and Borglin, S.   | 2007  | 
						
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                                              | Evaluation of aeration technology for the Stockton Deep Water Ship Channel  | Ecosystem Water and Sediment Quality  | Brown, R. T.  | 2003  | 
						
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                                              | Task 6: Modeling Study, Forecasting Procedure Report  | Ecosystem Water and Sediment Quality  | Herr, J. W. and C. W. Chen  | 2007  | 
						
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                                              | Sources and Transport of Nutrients, Organic Carbon, and Chlorophyll-a in the San Joaquin River Upstream of Vernalis, California, during Summer and Fall, 2000 and 2001  | Ecosystem Water and Sediment Quality  | Kratzer, C. R.,  Dileanis, P.D., C. Zamora and S. R. Silva  | 2003  | 
						
							 | 
                                                
                                              | Linking the San Joaquin River to the Stockton Deep Water Ship Channel Draft Final Report  | Ecosystem Water and Sediment Quality  | Litton, G. M., M. S. Brunell, J. C. Monroe and Quinn,N.W.T  | 2008  | 
						
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                                              | Bathymetric and geophysical surveys of Englebright Lake, Yuba-Nevada Counties, California  | Ecosystem Water and Sediment Quality  | Childs, J. R., N. P. Snyder and M. A. Hampton  | 2003  | 
						
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                                              | Transport, transformation, and effects of selenium and carbon in the Delta of the Sacramento-San Joaquin Rivers: implications for ecosystem restoration  | Ecosystem Water and Sediment Quality  | Lucas, L. and  Stewart, R.  | 2005  | 
						
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                                              | Discriminating between west-side sources of nutrients and organic carbon contributing to algal growth and oxygen demand in the San Joaquin River  | Ecosystem Water and Sediment Quality  | Stringfellow, W. T. and  Quinn, N.W.T.  | 2002  | 
						
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                                              | Real-Time Water Quality Management in the Grassland Water District  | Ecosystem Water and Sediment Quality  | Quinn, N.W.T.,  Hanna, W.M.,  Burns, J.R.,  Taylor,C.M., D. Marciochi,  Lower, S.,  Woodruff, V.,  Wright, D. and Poole, T.   | 2004  | 
						
							 | 
                                                
                                              | San Joaquin River Up-Stream DO TMDL Project -- Task 12: DO Project Final Report  | Ecosystem Water and Sediment Quality  | Stringfellow, W. T.  | 2008  | 
						
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                                              | Mercury and methylmercury processes in north San Francisco Bay tidal wetland ecosystems  | Ecosystem Water and Sediment Quality  | Yee, D.,  Collins, J.,  Grenier, L.,   Takekawa, J.,   Tsao-Melcer, D.,  Woo, I.,  Schwarzbach, S.,  Marvin-DiPasquale, M.,   Windham, L.,  Krabbenhoft, D.,  Olund, S. and  DeWild, J.  | 2008  | 
						
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                                              | Task 6: Effluent Discharge Point Water Collection and Exposure Report  | Ecosystem Water and Sediment Quality  | Brander, S. M.,  Cole, B.,  Hasenbein, M.,  Jeffries, K. M.,  DeCourten, B.,  Fangue, N. A. and  Connon, R. E.  | 8/13/2013  | 
						
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                                              | Menidia beryllina baseline spawning trials  | Ecosystem Water and Sediment Quality  | Brander, S. M.,  Cole, B.,  Jeffries, K. M.,  DeCourten, B.,  Fangue, N. A. and  Connon, R. E.  | 2013  | 
						
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                                              | Interplay of environmental forcing and growth-selective mortality in the poor year-class success of delta smelt in 2005  | At-Risk Species Assessment  | Bennett, W. A.,  Hobbs, J. A. and  Teh, S. J.  | 2005  | 
						
							 | 
                                                
                                              | Monitoring Responses of the Delta Smelt Population to Multiple Restoration Actions in the San Fransico Estuary  | At-Risk Species Assessment  | Bennett, W. A., S. J. Teh and  Kimmerer, W.  | 2013  | 
						
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                                              | Lindsey Slough Freshwater Tidal Marsh Enhancement Project - Cultural Resources Asessment  | Shallow Water and Marsh Habitat  | Coleman, J.  | 2012  | 
						
							 | 
                                                
                                              | Delta Working Lands Final Report  | Upland Habitat and Wildlife Friendly Agriculture  | Will, A. and  Hart, J.  | 9/2013  | 
						
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                                              | Delta Working Landscapes -- Feasibility Report  | Upland Habitat and Wildlife Friendly Agriculture  | Will, A. and  Hart, J.  | 2013  |